BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E06SP1|AL429070
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1752 0.0
>3x_Contig1781
Length = 20717
Score = 1752 bits (883), Expect = 0.0
Identities = 893/896 (99%), Gaps = 1/896 (0%)
Strand = Plus / Plus
Query: 1 caangtagactattgaaaggtggtgaaccagatgaaagcggggtatcgaaacaaatcttg 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 caaggtagactattgaaaggtggtgaaccagatgaaagcggggtatcgaaacaaatcttg 4923
Query: 61 aacgatttcaacagaggtaagatcccatggttcgtaccaccaccagagaaggacaagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 aacgatttcaacagaggtaagatcccatggttcgtaccaccaccagagaaggacaagatt 4983
Query: 121 gaggaaaaggaacctggtgataagaaacgtcctgcagaggaaaatcaagaagatcaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 gaggaaaaggaacctggtgataagaaacgtcctgcagaggaaaatcaagaagatcaagaa 5043
Query: 181 gaggaagagaaggagcaagaggaacaagaagaacctgtttctaaaaaggccaaaaaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 gaggaagagaaggagcaagaggaacaagaagaacctgtttctaaaaaggccaaaaaggaa 5103
Query: 241 taaaccaaacacttcctcaatatttaattctctccagacacgggcatcgctttatatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5104 taaaccaaacacttcctcaatatttaattctctccagacacgggcatcgctttatatata 5163
Query: 301 gacacaccatatacaatcttatcggatctatcgtttttgtacattaatatcaatcggatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5164 gacacaccatatacaatcttatcggatctatcgtttttgtacattaatatcaatcggatg 5223
Query: 361 acttaggctaagtcttgcacatagaaatttattaaataaatagtagaaaggctggataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5224 acttaggctaagtcttgcacatagaaatttattaaataaatagtagaaaggctggataac 5283
Query: 421 accgaacgttgtgaagcatgcagatcaggggcagaaacactggacaatggacccattcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 accgaacgttgtgaagcatgcagatcaggggcagaaacactggacaatggacccattcgg 5343
Query: 481 gt-cactgtccattgagaagtggtgccagtggtaatatcaacaccgtacacaatgacatt 539
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5344 gtccactgtccattgagaagtggtgccagtggtaatatcaacaccgtacacaatgacatt 5403
Query: 540 tccctcgaaaattctgtttctgccaaagaggaacgaaacaggaaagcctttagcattaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5404 tccctcgaaaattctgtttctgccaaagaggaacgaaacaggaaagcctttagcattaga 5463
Query: 600 taaggaagagacagagacatatatggttggaatacgattcaattctgatttaagagttgt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 taaggaagagacagagacatatatggttggaatacgattcaattctgatttaagagttgt 5523
Query: 660 catttaggactactccagtaagtacgatagaattttaatgcaatctcttaatagtcagct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 catttaggactactccagtaagtacgatagaattttaatgcaatctcttaatagtcagct 5583
Query: 720 cggaggattgccaaattcggagcaatttttcgggaagggcgctgttcagcagcaagggcc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5584 cggaggattgccaaattcggagcaatttttcgggaagggcgctgttcagcagcaagggcc 5643
Query: 780 agttgggatgaacgggatgcttttctccccttctatgaatagtactcgtatgatgcctca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644 agttgggatgaacgggatgcttttctccccttctatgaatagtactcgtatgatgcctca 5703
Query: 840 acagtcgcaacaaccacatgtgctgcatgggcttgagaacaatgggggkcttcaaa 895
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5704 acagtcgcaacaaccacatgtgctgcatgggcttgagaacaatgggggtcttcaaa 5759
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6636
Number of Sequences: 1807
Number of extensions: 6636
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)